multithreading - osx 10.10.5 Python 2.7 "Fatal Python error: PyThreadState_Get: no current thread Abort trap: 6" error -
i using homebrew python 2.7 , installed nupic
$ pip install nupic then error when try import nupic
$ python python 2.7.11 (default, jan 22 2016, 08:28:37) [gcc 4.2.1 compatible apple llvm 7.0.2 (clang-700.1.81)] on darwin type "help", "copyright", "credits" or "license" more information. >>> nupic.bindings.algorithms import spatialpooler sp fatal python error: pythreadstate_get: no current thread abort trap: 6 $ after error:
fatal python error: pythreadstate_get: no current thread
abort trap: 6
python exits , asks if want report apple. here report.
process: python [72449] path: /usr/local/cellar/python/2.7.11/frameworks/python.framework/versions/2.7/resources/python.app/contents/macos/python identifier: python version: 2.7.11 (2.7.11) code type: x86-64 (native) parent process: bash [93469] responsible: terminal [93466] user id: 501 date/time: 2016-02-06 17:30:50.442 +0900 os version: mac os x 10.10.5 (14f1021) report version: 11 anonymous uuid: 855d5299-1dd9-879d-f358-9483d5ca0033 sleep/wake uuid: a2948a3a-b3ab-4f3c-8214-250aac8ab13f time awake since boot: 75000 seconds time since wake: 7800 seconds crashed thread: 0 dispatch queue: com.apple.main-thread exception type: exc_crash (sigabrt) exception codes: 0x0000000000000000, 0x0000000000000000 application specific information: abort() called thread 0 crashed:: dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff85532286 __pthread_kill + 10 1 libsystem_c.dylib 0x00007fff932e79b3 abort + 129 2 org.python.python 0x000000010a8fa2a3 py_fatalerror + 49 3 org.python.python 0x000000010a8f9785 pythreadstate_get + 28 4 org.python.python 0x000000010a8f6522 py_initmodule4_64 + 62 5 _algorithms.so 0x000000010a0d7c7c init_algorithms + 796 6 org.python.python 0x0000000108fdb98b _pyimport_loaddynamicmodule + 140 7 org.python.python 0x0000000108fdb422 imp_load_module + 243 8 org.python.python 0x0000000108fc5be5 pyeval_evalframeex + 26858 9 org.python.python 0x0000000108fc9745 fast_function + 264 10 org.python.python 0x0000000108fc5b0b pyeval_evalframeex + 26640 11 org.python.python 0x0000000108fbf109 pyeval_evalcodeex + 1583 12 org.python.python 0x0000000108fbead4 pyeval_evalcode + 54 13 org.python.python 0x0000000108fd7f0f pyimport_execcodemoduleex + 241 14 org.python.python 0x0000000108fdac27 load_source_module + 1089 15 org.python.python 0x0000000108fda689 import_submodule + 267 16 org.python.python 0x0000000108fda24f load_next + 284 17 org.python.python 0x0000000108fd946b pyimport_importmodulelevel + 1195 18 org.python.python 0x0000000108fba70a builtin___import__ + 135 19 org.python.python 0x0000000108f45ef0 pyobject_call + 99 20 org.python.python 0x0000000108fc9087 pyeval_callobjectwithkeywords + 165 21 org.python.python 0x0000000108fc438a pyeval_evalframeex + 20623 22 org.python.python 0x0000000108fbf109 pyeval_evalcodeex + 1583 23 org.python.python 0x0000000108fbead4 pyeval_evalcode + 54 24 org.python.python 0x0000000108fe2eb9 run_mod + 53 25 org.python.python 0x0000000108fe2f5c pyrun_fileexflags + 133 26 org.python.python 0x0000000108fe2aab pyrun_simplefileexflags + 698 27 org.python.python 0x0000000108ff445d py_main + 3137 28 libdyld.dylib 0x00007fff9331a5c9 start + 1 thread 0 crashed x86 thread state (64-bit): rax: 0x0000000000000000 rbx: 0x0000000000000006 rcx: 0x00007fff56ccd9f8 rdx: 0x0000000000000000 rdi: 0x0000000000000713 rsi: 0x0000000000000006 rbp: 0x00007fff56ccda20 rsp: 0x00007fff56ccd9f8 r8: 0x00007fff56ccda10 r9: 0x00007fff75557300 r10: 0x0000000008000000 r11: 0x0000000000000206 r12: 0x0000000109d92e94 r13: 0x000000010a4a9010 r14: 0x00007fff75557300 r15: 0x000000010906c310 rip: 0x00007fff85532286 rfl: 0x0000000000000206 cr2: 0x00007fff75ea9fd8 logical cpu: 0 error code: 0x02000148 trap number: 133 binary images: 0x108f31000 - 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0x7fff8a3b8ff7 liblinearalgebra.dylib (1128) <e78ccbaa-a999-3b65-8ec9-06db15e67c37> /system/library/frameworks/accelerate.framework/versions/a/frameworks/veclib.framework/versions/a/liblinearalgebra.dylib 0x7fff8a3b9000 - 0x7fff8a3e1fff libsystem_info.dylib (459.40.1) <2e16c4b3-a327-3957-9c41-143911979a1e> /usr/lib/system/libsystem_info.dylib 0x7fff8a5b8000 - 0x7fff8a5bdfff libsystem_stats.dylib (163.30.2) <d0e96837-3cf6-323d-b711-6df6f660e530> /usr/lib/system/libsystem_stats.dylib 0x7fff8ad36000 - 0x7fff8ad3efff libsystem_platform.dylib (63) <64e34079-d712-3d66-9ce2-418624a5c040> /usr/lib/system/libsystem_platform.dylib 0x7fff8ad93000 - 0x7fff8b1a0ff7 liblapack.dylib (1128) <f9201ae7-b031-36db-bcf8-971e994ef7c1> /system/library/frameworks/accelerate.framework/versions/a/frameworks/veclib.framework/versions/a/liblapack.dylib 0x7fff8b327000 - 0x7fff8b32eff7 libcompiler_rt.dylib (35) <bf8fc133-ee10-3da6-9b90-92039e28678f> /usr/lib/system/libcompiler_rt.dylib 0x7fff8bda2000 - 0x7fff8bdb8ff7 libsystem_asl.dylib (267) <f153ac5b-0542-356e-88c8-20a62ca704e2> /usr/lib/system/libsystem_asl.dylib 0x7fff8bdf2000 - 0x7fff8bdf4fff libsystem_sandbox.dylib (358.20.5) <3f5e973f-c702-31ac-97bc-05f5c195683c> /usr/lib/system/libsystem_sandbox.dylib 0x7fff8c836000 - 0x7fff8ca3046f libobjc.a.dylib (647) <759e155d-bc42-3d4e-869b-6f57d477177c> /usr/lib/libobjc.a.dylib 0x7fff8cb22000 - 0x7fff8cb5afff libsystem_network.dylib (412.20.3) <6105c134-6722-3c0a-a4ce-5e1261e2e1cc> /usr/lib/system/libsystem_network.dylib 0x7fff8cbcb000 - 0x7fff8cbccfff libsystem_secinit.dylib (18) <581dad0f-6b63-3a48-b63b-917af799abaa> /usr/lib/system/libsystem_secinit.dylib 0x7fff8cbcd000 - 0x7fff8cbd6ff7 libsystem_notify.dylib (133.1.1) <61147800-f320-3daa-850c-badf33855f29> /usr/lib/system/libsystem_notify.dylib 0x7fff8ccbc000 - 0x7fff8ccbcfff com.apple.accelerate.veclib (3.10 - veclib 3.10) <9d749502-a228-3bf1-b52f-a182deeb2c4d> /system/library/frameworks/accelerate.framework/versions/a/frameworks/veclib.framework/versions/a/veclib 0x7fff8d03e000 - 0x7fff8d044fff libsystem_trace.dylib (72.20.1) <840f5301-b55a-3078-90b9-feffd6cd741a> /usr/lib/system/libsystem_trace.dylib 0x7fff8dd5f000 - 0x7fff8dd65ff7 libsystem_networkextension.dylib (167.40.3) <ba58b30b-8377-3b0a-8ae3-4f84021d9d4e> /usr/lib/system/libsystem_networkextension.dylib 0x7fff8dd66000 - 0x7fff8dd90ff7 libdispatch.dylib (442.50.1) <a61e703c-784a-3698-b513-75dd12aad6dc> /usr/lib/system/libdispatch.dylib 0x7fff8e065000 - 0x7fff8e06aff7 libmacho.dylib (862) <126ca2ed-de91-308f-8881-b9daec3c63b6> /usr/lib/system/libmacho.dylib 0x7fff8ef0d000 - 0x7fff8ef0dfff com.apple.accelerate (1.10 - accelerate 1.10) <2c8af258-4f11-3bec-a826-22d7199b3975> /system/library/frameworks/accelerate.framework/versions/a/accelerate 0x7fff8ef4c000 - 0x7fff8ef55fff libsystem_pthread.dylib (105.40.1) <ace90967-ecd0-3251-aeeb-461e3c6414f7> /usr/lib/system/libsystem_pthread.dylib 0x7fff8f9c2000 - 0x7fff8f9c3fff libdiagnosticmessagesclient.dylib (100) <2ee8e436-5cdc-34c5-9959-5ba218d507fb> /usr/lib/libdiagnosticmessagesclient.dylib 0x7fff9028b000 - 0x7fff9039dff7 libvdsp.dylib (516) <151b3ccb-77d3-3715-a3d0-7c74cd5c7ffc> /system/library/frameworks/accelerate.framework/versions/a/frameworks/veclib.framework/versions/a/libvdsp.dylib 0x7fff914ff000 - 0x7fff91504ff7 libunwind.dylib (35.3) <be7e51a0-b6ea-3a54-9cca-9d88f683a6d6> /usr/lib/system/libunwind.dylib 0x7fff917f1000 - 0x7fff9186afe7 libcorecrypto.dylib (233.30.1) <5779ffa0-4d9a-3ad4-b7f2-618227621dc8> /usr/lib/system/libcorecrypto.dylib 0x7fff91adc000 - 0x7fff91ae4fff libsystem_dnssd.dylib (576.50.2) <9ec5af92-d0d2-3bde-92b6-d3730d3865c8> /usr/lib/system/libsystem_dnssd.dylib 0x7fff91eaf000 - 0x7fff91f5efe7 libvmisc.dylib (516) <6739e390-46e7-3bfa-9b69-b278562326e6> /system/library/frameworks/accelerate.framework/versions/a/frameworks/veclib.framework/versions/a/libvmisc.dylib 0x7fff91f5f000 - 0x7fff922f7ff7 com.apple.corefoundation (6.9 - 1153.18) <5c0892b8-9691-341f-9279-ca3a74d59aa0> /system/library/frameworks/corefoundation.framework/versions/a/corefoundation 0x7fff922fc000 - 0x7fff924e1ff7 libicucore.a.dylib (531.50) <caa7ace0-4012-3a13-864d-2b56b4b072fd> /usr/lib/libicucore.a.dylib 0x7fff92a54000 - 0x7fff92a7cfff libxpc.dylib (559.40.1) <5c829202-962e-3744-8b50-00d38cc88e84> /usr/lib/system/libxpc.dylib 0x7fff92acd000 - 0x7fff92af8fff libc++abi.dylib (125) <88a22a0f-87c6-3002-bfba-ac0f2808b8b9> /usr/lib/libc++abi.dylib 0x7fff92c13000 - 0x7fff92c1efff libcommoncrypto.dylib (60061.30.1) <e789748d-f9a7-3cff-b317-90df348b1e95> /usr/lib/system/libcommoncrypto.dylib 0x7fff9328a000 - 0x7fff93316fe7 libsystem_c.dylib (1044.40.1) <f0635e0f-fe4b-34db-acf9-a58c1e9070e9> /usr/lib/system/libsystem_c.dylib 0x7fff93317000 - 0x7fff9331aff7 libdyld.dylib (353.2.3) <cfbbe540-d503-3afc-b5d6-644f1e69949b> /usr/lib/system/libdyld.dylib external modification summary: calls made other processes targeting process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 calls made process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 calls made processes on machine: task_for_pid: 73166 thread_create: 0 thread_set_state: 0 vm region summary: readonly portion of libraries: total=109.5m resident=95.1m(87%) swapped_out_or_unallocated=14.4m(13%) writable regions: total=53.9m written=13.3m(25%) resident=15.8m(29%) swapped_out=0k(0%) unallocated=38.1m(71%) region type virtual =========== ======= kernel alloc once 4k malloc 44.8m malloc (admin) 16k stack guard 56.0m stack 8192k vm_allocate 16k __data 2940k __linkedit 75.9m __text 33.6m __unicode 552k shared memory 4k =========== ======= total 221.8m model: macbookpro12,1, bootrom mbp121.0167.b14, 2 processors, intel core i5, 2.7 ghz, 8 gb, smc 2.28f7 graphics: intel iris graphics 6100, intel iris graphics 6100, built-in memory module: bank 0/dimm0, 4 gb, ddr3, 1867 mhz, 0x80ad, 0x483943434e4e4e424c54414c41522d4e5544 memory module: bank 1/dimm0, 4 gb, ddr3, 1867 mhz, 0x80ad, 0x483943434e4e4e424c54414c41522d4e5544 airport: spairport_wireless_card_type_airport_extreme (0x14e4, 0x133), broadcom bcm43xx 1.0 (7.15.166.24.3) bluetooth: version 4.3.6f3 16238, 3 services, 27 devices, 1 incoming serial ports network service: wi-fi, airport, en0 serial ata device: apple ssd sm0256g, 251 gb usb device: internal memory card reader usb device: bluetooth usb host controller thunderbolt bus: macbook pro, apple inc., 27.1 the problem not happen if run native python installed on mac. following works fine.
$ /usr/bin/python python 2.7.10 (default, jul 14 2015, 19:46:27) [gcc 4.2.1 compatible apple llvm 6.0 (clang-600.0.39)] on darwin type "help", "copyright", "credits" or "license" more information. >>> nupic.bindings.algorithms import spatialpooler sp >>> any appreciated.
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