r - Ballgown plotTranscripts function -


i using ballgown measure transcript abundance in rna-seq samples. want plot transcripts of gene using plottranscript function of ballgown package.

when try run:

plottranscripts(gene='ddx11l1', gown=bg, samples='sample3_output',    meas='fpkm', colorby='transcript', main='transcripts gene ddx11l1: sample 3, fpkm')

i error:

error in seq.default(min(gtrans$start), max(gtrans$end), = 1) :  'from' cannot na, nan or infinite in addition: warning messages: 1: in min(gtrans$start) : no non-missing arguments min; returning inf 2: in max(gtrans$end) : no non-missing arguments max; returning -inf

i have no clue means. until point executed without errors/warnings.

any appreciated.

it seems need gene_id rather gene_name column 9 file t_data.ctab


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